Intro to Pathway Analysis and Visualization

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This workshop introduces biologists to functional enrichment analysis (including pathways and GO) and effective visualization. You will learn about different enrichment analysis methods, and will get hands-on experience using online functional enrichment tools. You will also learn how to visualize data on pathways resulting from enrichment analysis. No programming experience required. Visit the workshop site […]

Intermediate R RNA-Seq Analysis

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RNA-Seq is a powerful tool to interrogate cellular functions. This intermediate workshop will teach you the skills you need to get the most out of your RNA-Seq data through analysis in R. By the end of the workshop, you will know how to: Go from a matrix of raw gene expression counts to differentially expressed […]

Intro to Pathway Modeling

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This workshop will teach you both why and how to use pathways in research and paper figures. First, you’ll get an overview of pathway drawing, covering tools and curation steps, including PathVisio, WikiPathways, Curation Guidelines, and the WikiPathways Curation Process. Then, you’ll have a chance to put your new knowledge to work in a hands-on […]

Whole Genome Sequence Analysis

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This course will be both theoretical and hands-on. You will learn the main tools used to do alignment, variant calling, annotation, and visualization. You will start with raw FASTQ reads and get to annotated variants (VCF files). Intermediate Level:  This is an intermediate workshop in the Whole Genome and Exome Analysis series. Prior experience with […]