Whole Genome Sequence Analysis

This course will be both theoretical and hands-on. You will learn the main tools used to do alignment, variant calling, annotation, and visualization. You will start with raw FASTQ reads and get to annotated variants (VCF files).

Intermediate Level:  This is an intermediate workshop in the Whole Genome and Exome Analysis series. Prior experience with command line is required. See introductory workshop: Introduction to Unix Command Line.