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Single Cell RNA-Seq Analysis
April 15 @ 10:00 am - 12:00 pm
One event on April 15, 2022 at 1:00 pm
One event on April 18, 2022 at 1:00 pm
This three-session workshop will focus on the analysis of single-cell RNA-Seq data, starting from raw count matrices and progressing to network analysis of single-cell datasets. You’ll analyze data using R.
Attendance at all three sessions is required.
April 15, 2022 • 10am–12pm: Loading data, quality control, normalization, feature selection, dimensionality reduction
April 15, 2022 • 1–3pm: Dimensionality reduction (continued), clustering, finding marker genes
April 18, 2022 • 1–3pm: Advanced discussion on normalization, differential analysis, batch-correction, and Q&A
- Familiarity with R and RStudio (e.g., reading in files, working with lists and dataframes)
- Some exposure to RNA-seq datasets